snapshotDirectory $SCRIPT_DIR/snapshots/color_coverage_993
new
genome hg19
preference SAM.SHOW_ALIGNMENT_TRACK false
load gs://genomics-public-data/platinum-genomes/bam/NA12877_S1.bam
load gs://genomics-public-data/platinum-genomes/bam/NA12878_S1.bam
goto myc
# Match tracks by name
setColor 255,0,0 "NA12877_S1.bam Coverage"
setColor 255,255,0 "NA12878_S1.bam Coverage"
snapshot matchByName.png
# Match tracks by path
setColor 0,255,0 gs://genomics-public-data/platinum-genomes/bam/NA12877_S1.bam
setColor 0,0,255 gs://genomics-public-data/platinum-genomes/bam/NA12878_S1.bam
snapshot matchByPath.png
preference SAM.SHOW_ALIGNMENT_TRACK true
